CRISPRone

CRISPRone report for GCA_001034855.1_ASM103485v1

♦ Seq 1: LEGE01000018.1 Pseudomonas aeruginosa strain Pae_CF67.07n CF67.07n_contig_18, whole genome shotgun sequence

⇒Summary: seq-len = 334569 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 57324-57952 bp Zoom in on locus 1 x11 CRISPR array Location: 57324-57952 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 57324-57952 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 57324-57952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEGE01000054.1 Pseudomonas aeruginosa strain Pae_CF67.07n CF67.07n_contig_54, whole genome shotgun sequence

⇒Summary: seq-len = 39484 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38136-39485 bp Zoom in on locus 1 x23 CRISPR array Location: 38136-39485 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 38136-39485 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38136-39485 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEGE01000067.1 Pseudomonas aeruginosa strain Pae_CF67.07n CF67.07n_contig_67, whole genome shotgun sequence

⇒Summary: seq-len = 32162 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21852-31950 bp Zoom in on locus 1 x23 CRISPR array Location: 21852-23201 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21852-23201 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23461-24435 bp Gene: COG1203:cas3 Type: Type-I Location: 24432-27662 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28073-29374 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29361-30344 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30355-31383 bp Gene: cd09739:cas6f Type: other Location: 31387-31950 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21852-23201 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)