CRISPRone

CRISPRone report for GCA_001034915.1_ASM103491v1

♦ Seq 1: LEGN01000027.1 Pseudomonas aeruginosa strain Pae_CF67.08c CF67.08c_contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 50109 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112-11989 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 112-1461 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 112-1461 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1721-2695 bp Gene: COG1203:cas3 Type: Type-I Location: 2692-5922 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6526-7644 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7631-8614 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8625-9653 bp Gene: cd09739:cas6f Type: other Location: 9657-10220 bp CRISPR array Location: 10405-11989 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 10405-11989 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 112-1461 bp]: array | spacers
           [Locus range 10405-11989 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEGN01000036.1 Pseudomonas aeruginosa strain Pae_CF67.08c CF67.08c_contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 111831 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111092-111720 bp Zoom in on locus 1 x11 CRISPR array Location: 111092-111720 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 111092-111720 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 111092-111720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)