CRISPRone

CRISPRone report for GCA_001035145.1_ASM103514v1

♦ Seq 1: LEGY01000034.1 Pseudomonas aeruginosa strain Pae_CF67.08n CF67.08n_contig_34, whole genome shotgun sequence

⇒Summary: seq-len = 127642 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 126904-127532 bp Zoom in on locus 1 x11 CRISPR array Location: 126904-127532 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 126904-127532 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 126904-127532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEGY01000041.1 Pseudomonas aeruginosa strain Pae_CF67.08n CF67.08n_contig_41, whole genome shotgun sequence

⇒Summary: seq-len = 50035 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111-11918 bp Zoom in on locus 1 x23 x26 CRISPR array Location: 111-1460 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 111-1460 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1720-2694 bp Gene: COG1203:cas3 Type: Type-I Location: 2691-5921 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6332-7633 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7620-8603 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8614-9642 bp Gene: cd09739:cas6f Type: other Location: 9646-10209 bp CRISPR array Location: 10394-11918 bp Num of repeats: 26 Spacers: s23-s47 CRISPR array Location: 10394-11918 bp Num of repeats: 26 Spacers: s23-s47 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 111-1460 bp]: array | spacers
           [Locus range 10394-11918 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)