CRISPRone

CRISPRone report for GCA_001035235.1_ASM103523v1

♦ Seq 1: LEHD01000018.1 Pseudomonas aeruginosa strain Pae_CF67.08s CF67.08s_contig_18, whole genome shotgun sequence

⇒Summary: seq-len = 210683 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 209945-210573 bp Zoom in on locus 1 x11 CRISPR array Location: 209945-210573 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 209945-210573 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 209945-210573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEHD01000054.1 Pseudomonas aeruginosa strain Pae_CF67.08s CF67.08s_contig_54, whole genome shotgun sequence

⇒Summary: seq-len = 50260 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111-11978 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 111-1460 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 111-1460 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1720-2694 bp Gene: COG1203:cas3 Type: Type-I Location: 2691-5921 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6332-7633 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7620-8603 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8614-9642 bp Gene: cd09739:cas6f Type: other Location: 9646-10209 bp CRISPR array Location: 10394-11978 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 10394-11978 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 111-1460 bp]: array | spacers
           [Locus range 10394-11978 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)