CRISPRone

CRISPRone report for GCA_001035245.1_ASM103524v1

♦ Seq 1: LEHE01000096.1 Pseudomonas aeruginosa strain Pae_CF67.08t CF67.08t_contig_96, whole genome shotgun sequence

⇒Summary: seq-len = 37139 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24389-36256 bp Zoom in on locus 1 x27 x23 CRISPR array Location: 24389-25974 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 24389-25974 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 26158-26721 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 26725-27753 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27764-28747 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28734-30035 bp Gene: COG1203:cas3 Type: Type-I Location: 30446-33676 bp Gene: cd09718:cas1 Type: universal Location: 33673-34647 bp CRISPR array Location: 34908-36256 bp Num of repeats: 23 Spacers: s27-s48 CRISPR array Location: 34908-36256 bp Num of repeats: 23 Spacers: s27-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24389-25974 bp]: array | spacers
           [Locus range 34908-36256 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)