CRISPRone

CRISPRone report for GCA_001035305.1_ASM103530v1

♦ Seq 1: LEHG01000082.1 Pseudomonas aeruginosa strain Pae_CF67.09b CF67.09b_contig_82, whole genome shotgun sequence

⇒Summary: seq-len = 496 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-496 bp Zoom in on locus 1 x9 CRISPR array Location: 0-496 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 0-496 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEHG01000067.1 Pseudomonas aeruginosa strain Pae_CF67.09b CF67.09b_contig_67, whole genome shotgun sequence

⇒Summary: seq-len = 12496 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-209 bp Zoom in on locus 1 x4 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEHG01000077.1 Pseudomonas aeruginosa strain Pae_CF67.09b CF67.09b_contig_77, whole genome shotgun sequence

⇒Summary: seq-len = 10872 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-10551 bp Zoom in on locus 1 x5 x23 CRISPR array Location: 1-269 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 1-269 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09739:cas6f Type: other Location: 453-1016 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1020-2048 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2059-3042 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3029-4330 bp Gene: COG1203:cas3 Type: Type-I Location: 4741-7971 bp Gene: cd09718:cas1 Type: universal Location: 7968-8942 bp CRISPR array Location: 9203-10551 bp Num of repeats: 23 Spacers: s5-s26 CRISPR array Location: 9203-10551 bp Num of repeats: 23 Spacers: s5-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-269 bp]: array | spacers
           [Locus range 9203-10551 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)