CRISPRone

CRISPRone report for GCA_001035315.1_ASM103531v1

♦ Seq 1: LEHI01000093.1 Pseudomonas aeruginosa strain Pae_CF67.09d CF67.09d_contig_93, whole genome shotgun sequence

⇒Summary: seq-len = 24844 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12656-24523 bp Zoom in on locus 1 x27 x23 CRISPR array Location: 12656-14241 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 12656-14241 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 14425-14988 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14992-16020 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 16031-17014 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 17001-18302 bp Gene: COG1203:cas3 Type: Type-I Location: 18713-21943 bp Gene: cd09718:cas1 Type: universal Location: 21940-22914 bp CRISPR array Location: 23175-24523 bp Num of repeats: 23 Spacers: s27-s48 CRISPR array Location: 23175-24523 bp Num of repeats: 23 Spacers: s27-s48 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12656-14241 bp]: array | spacers
           [Locus range 23175-24523 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEHI01000012.1 Pseudomonas aeruginosa strain Pae_CF67.09d CF67.09d_contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 390713 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 327796-328425 bp Zoom in on locus 1 x11 CRISPR array Location: 327796-328425 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 327796-328425 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 327796-328425 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)