CRISPRone

CRISPRone report for GCA_001035495.1_ASM103549v1

♦ Seq 1: LEHQ01000043.1 Pseudomonas aeruginosa strain Pae_CF67.09l CF67.09l_contig_43, whole genome shotgun sequence

⇒Summary: seq-len = 11205 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 895-10993 bp Zoom in on locus 1 x23 CRISPR array Location: 895-2244 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 895-2244 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2504-3478 bp Gene: COG1203:cas3 Type: Type-I Location: 3475-6705 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7116-8417 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8404-9387 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9398-10426 bp Gene: cd09739:cas6f Type: other Location: 10430-10993 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 895-2244 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEHQ01000059.1 Pseudomonas aeruginosa strain Pae_CF67.09l CF67.09l_contig_59, whole genome shotgun sequence

⇒Summary: seq-len = 807 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-320 bp Zoom in on locus 1 x6 CRISPR array Location: 0-320 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-320 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-320 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEHQ01000055.1 Pseudomonas aeruginosa strain Pae_CF67.09l CF67.09l_contig_55, whole genome shotgun sequence

⇒Summary: seq-len = 7544 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6348-7545 bp Zoom in on locus 1 x3 x16 CRISPR array Location: 6348-6496 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 6348-6496 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 6620-7545 bp Num of repeats: 16 Spacers: s3-s17 CRISPR array Location: 6620-7545 bp Num of repeats: 16 Spacers: s3-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6348-6496 bp]: array | spacers
           [Locus range 6620-7545 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)