CRISPRone

CRISPRone report for GCA_001035535.1_ASM103553v1

♦ Seq 1: LEHS01000018.1 Pseudomonas aeruginosa strain Pae_CF67.09n CF67.09n_contig_18, whole genome shotgun sequence

⇒Summary: seq-len = 314418 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 284716-285345 bp Zoom in on locus 1 x11 CRISPR array Location: 284716-285345 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 284716-285345 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 284716-285345 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEHS01000020.1 Pseudomonas aeruginosa strain Pae_CF67.09n CF67.09n_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 71952 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21304-32981 bp Zoom in on locus 1 x6 x13 x26 CRISPR array Location: 21304-21632 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 21304-21632 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 21774-22523 bp Num of repeats: 13 Spacers: s6-s17 CRISPR array Location: 21774-22523 bp Num of repeats: 13 Spacers: s6-s17 Gene: cd09718:cas1 Type: universal Location: 22783-23757 bp Gene: COG1203:cas3 Type: Type-I Location: 23754-26984 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27395-28696 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28683-29666 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29677-30705 bp Gene: cd09739:cas6f Type: other Location: 30709-31272 bp CRISPR array Location: 31457-32981 bp Num of repeats: 26 Spacers: s18-s42 CRISPR array Location: 31457-32981 bp Num of repeats: 26 Spacers: s18-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21304-21632 bp]: array | spacers
           [Locus range 21774-22523 bp]: array | spacers
           [Locus range 31457-32981 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)