CRISPRone

CRISPRone report for GCA_001035765.1_ASM103576v1

♦ Seq 1: LEID01000069.1 Pseudomonas aeruginosa strain Pae_CF67.10e CF67.10e_contig_69, whole genome shotgun sequence

⇒Summary: seq-len = 985 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-985 bp Zoom in on locus 1 x17 CRISPR array Location: 1-985 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 1-985 bp Num of repeats: 17 Spacers: s1-s16 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEID01000026.1 Pseudomonas aeruginosa strain Pae_CF67.10e CF67.10e_contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 369814 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21793-32524 bp Zoom in on locus 1 x23 x8 CRISPR array Location: 21793-23142 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21793-23142 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23402-24376 bp Gene: COG1203:cas3 Type: Type-I Location: 24373-27603 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28014-29315 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29302-30285 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30296-31324 bp Gene: cd09739:cas6f Type: other Location: 31328-31891 bp CRISPR array Location: 32076-32524 bp Num of repeats: 8 Spacers: s23-s29 CRISPR array Location: 32076-32524 bp Num of repeats: 8 Spacers: s23-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21793-23142 bp]: array | spacers
           [Locus range 32076-32524 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)