CRISPRone

CRISPRone report for GCA_001035785.1_ASM103578v1

♦ Seq 1: LEIE01000149.1 Pseudomonas aeruginosa strain Pae_CF67.10f CF67.10f_contig_149, whole genome shotgun sequence

⇒Summary: seq-len = 253 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-264 bp Zoom in on locus 1 x5 CRISPR array Location: 1-264 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 1-264 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-264 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEIE01000027.1 Pseudomonas aeruginosa strain Pae_CF67.10f CF67.10f_contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 101000 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62298-62866 bp Zoom in on locus 1 x10 CRISPR array Location: 62298-62866 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 62298-62866 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62298-62866 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEIE01000063.1 Pseudomonas aeruginosa strain Pae_CF67.10f CF67.10f_contig_63, whole genome shotgun sequence

⇒Summary: seq-len = 10633 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 323-10421 bp Zoom in on locus 1 x23 CRISPR array Location: 323-1672 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 323-1672 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1932-2906 bp Gene: COG1203:cas3 Type: Type-I Location: 2903-6133 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6544-7845 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7832-8815 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8826-9854 bp Gene: cd09739:cas6f Type: other Location: 9858-10421 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 323-1672 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)