CRISPRone

CRISPRone report for GCA_001035865.1_ASM103586v1

♦ Seq 1: LEII01000008.1 Pseudomonas aeruginosa strain Pae_CF67.10j CF67.10j_contig_8, whole genome shotgun sequence

⇒Summary: seq-len = 394998 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 344133-356000 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 344133-345482 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 344133-345482 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 345742-346716 bp Gene: COG1203:cas3 Type: Type-I Location: 346713-349943 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 350354-351655 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 351642-352625 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 352636-353664 bp Gene: cd09739:cas6f Type: other Location: 353668-354231 bp CRISPR array Location: 354416-356000 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 354416-356000 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 344133-345482 bp]: array | spacers
           [Locus range 354416-356000 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)