CRISPRone

CRISPRone report for GCA_001035885.1_ASM103588v1

♦ Seq 1: LEIK01000015.1 Pseudomonas aeruginosa strain Pae_CF67.10l CF67.10l_contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 161965 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112024-123831 bp Zoom in on locus 1 x23 x26 CRISPR array Location: 112024-113373 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 112024-113373 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 113633-114607 bp Gene: COG1203:cas3 Type: Type-I Location: 114604-117834 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 118245-119546 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 119533-120516 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 120527-121555 bp Gene: cd09739:cas6f Type: other Location: 121559-122122 bp CRISPR array Location: 122307-123831 bp Num of repeats: 26 Spacers: s23-s47 CRISPR array Location: 122307-123831 bp Num of repeats: 26 Spacers: s23-s47 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 112024-113373 bp]: array | spacers
           [Locus range 122307-123831 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEIK01000092.1 Pseudomonas aeruginosa strain Pae_CF67.10l CF67.10l_contig_92, whole genome shotgun sequence

⇒Summary: seq-len = 524 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 309-521 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 309-521 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEIK01000001.1 Pseudomonas aeruginosa strain Pae_CF67.10l CF67.10l_contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 445279 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 382344-382973 bp Zoom in on locus 1 x11 CRISPR array Location: 382344-382973 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 382344-382973 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 382344-382973 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)