CRISPRone

CRISPRone report for GCA_001035925.1_ASM103592v1

♦ Seq 1: LEIL01000003.1 Pseudomonas aeruginosa strain Pae_CF67.10m CF67.10m_contig_3, whole genome shotgun sequence

⇒Summary: seq-len = 72523 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38670-50537 bp Zoom in on locus 1 x27 x23 CRISPR array Location: 38670-40255 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38670-40255 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 40439-41002 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41006-42034 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 42045-43028 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 43015-44316 bp Gene: COG1203:cas3 Type: Type-I Location: 44727-47957 bp Gene: cd09718:cas1 Type: universal Location: 47954-48928 bp CRISPR array Location: 49189-50537 bp Num of repeats: 23 Spacers: s27-s48 CRISPR array Location: 49189-50537 bp Num of repeats: 23 Spacers: s27-s48 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38670-40255 bp]: array | spacers
           [Locus range 49189-50537 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEIL01000024.1 Pseudomonas aeruginosa strain Pae_CF67.10m CF67.10m_contig_24, whole genome shotgun sequence

⇒Summary: seq-len = 255372 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62290-62918 bp Zoom in on locus 1 x11 CRISPR array Location: 62290-62918 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 62290-62918 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62290-62918 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)