CRISPRone

CRISPRone report for GCA_001036025.1_ASM103602v1

♦ Seq 1: LEIQ01000042.1 Pseudomonas aeruginosa strain Pae_CF67.10r CF67.10r_contig_42, whole genome shotgun sequence

⇒Summary: seq-len = 62365 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-77 bp Zoom in on locus 1 x2 CRISPR array Location: 0-77 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 0-77 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-77 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEIQ01000119.1 Pseudomonas aeruginosa strain Pae_CF67.10r CF67.10r_contig_119, whole genome shotgun sequence

⇒Summary: seq-len = 373 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-384 bp Zoom in on locus 1 x7 CRISPR array Location: 1-384 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1-384 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-384 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEIQ01000025.1 Pseudomonas aeruginosa strain Pae_CF67.10r CF67.10r_contig_25, whole genome shotgun sequence

⇒Summary: seq-len = 32053 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21743-31841 bp Zoom in on locus 1 x23 CRISPR array Location: 21743-23092 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21743-23092 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23352-24326 bp Gene: COG1203:cas3 Type: Type-I Location: 24323-27553 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27964-29265 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29252-30235 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30246-31274 bp Gene: cd09739:cas6f Type: other Location: 31278-31841 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21743-23092 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEIQ01000086.1 Pseudomonas aeruginosa strain Pae_CF67.10r CF67.10r_contig_86, whole genome shotgun sequence

⇒Summary: seq-len = 209 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-209 bp Zoom in on locus 1 x4 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)