CRISPRone

CRISPRone report for GCA_001036185.1_ASM103618v1

♦ Seq 1: LEIY01000015.1 Pseudomonas aeruginosa strain Pae_CF67.11f CF67.11f_contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 111602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111334-111602 bp Zoom in on locus 1 x5 CRISPR array Location: 111334-111602 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 111334-111602 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 111334-111602 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEIY01000082.1 Pseudomonas aeruginosa strain Pae_CF67.11f CF67.11f_contig_82, whole genome shotgun sequence

⇒Summary: seq-len = 208 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-208 bp Zoom in on locus 1 x4 CRISPR array Location: 1-208 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-208 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-208 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEIY01000008.1 Pseudomonas aeruginosa strain Pae_CF67.11f CF67.11f_contig_8, whole genome shotgun sequence

⇒Summary: seq-len = 494673 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-329 bp Zoom in on locus 1 x6 CRISPR array Location: 1-329 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1-329 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEIY01000035.1 Pseudomonas aeruginosa strain Pae_CF67.11f CF67.11f_contig_35, whole genome shotgun sequence

⇒Summary: seq-len = 31619 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 213-10311 bp Zoom in on locus 1 x23 Gene: cd09739:cas6f Type: other Location: 213-776 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 780-1808 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1819-2802 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2789-4090 bp Gene: COG1203:cas3 Type: Type-I Location: 4501-7731 bp Gene: cd09718:cas1 Type: universal Location: 7728-8702 bp CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8963-10311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)