CRISPRone

CRISPRone report for GCA_001036225.1_ASM103622v1

♦ Seq 1: LEJA01000036.1 Pseudomonas aeruginosa strain Pae_CF67.11h CF67.11h_contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 63709 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62330-62898 bp Zoom in on locus 1 x10 CRISPR array Location: 62330-62898 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 62330-62898 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62330-62898 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJA01000064.1 Pseudomonas aeruginosa strain Pae_CF67.11h CF67.11h_contig_64, whole genome shotgun sequence

⇒Summary: seq-len = 50410 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 409-12276 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 409-1758 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 409-1758 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2018-2992 bp Gene: COG1203:cas3 Type: Type-I Location: 2989-6219 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6630-7931 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7918-8901 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8912-9940 bp Gene: cd09739:cas6f Type: other Location: 9944-10507 bp CRISPR array Location: 10692-12276 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 10692-12276 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 409-1758 bp]: array | spacers
           [Locus range 10692-12276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)