CRISPRone

CRISPRone report for GCA_001036255.1_ASM103625v1

♦ Seq 1: LEJC01000009.1 Pseudomonas aeruginosa strain Pae_CF67.11j CF67.11j_contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 207899 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-656 bp Zoom in on locus 1 x11 CRISPR array Location: 27-656 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 27-656 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 27-656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJC01000019.1 Pseudomonas aeruginosa strain Pae_CF67.11j CF67.11j_contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 48652 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27-10517 bp Zoom in on locus 1 x23 x4 CRISPR array Location: 27-1376 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 27-1376 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1636-2610 bp Gene: COG1203:cas3 Type: Type-I Location: 2607-5837 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6248-7549 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7536-8519 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8530-9558 bp Gene: cd09739:cas6f Type: other Location: 9562-10125 bp CRISPR array Location: 10310-10517 bp Num of repeats: 4 Spacers: s23-s25 CRISPR array Location: 10310-10517 bp Num of repeats: 4 Spacers: s23-s25 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27-1376 bp]: array | spacers
           [Locus range 10310-10517 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEJC01000046.1 Pseudomonas aeruginosa strain Pae_CF67.11j CF67.11j_contig_46, whole genome shotgun sequence

⇒Summary: seq-len = 727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-737 bp Zoom in on locus 1 x13 CRISPR array Location: 0-737 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 0-737 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEJC01000075.1 Pseudomonas aeruginosa strain Pae_CF67.11j CF67.11j_contig_75, whole genome shotgun sequence

⇒Summary: seq-len = 250 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-260 bp Zoom in on locus 1 x5 CRISPR array Location: 0-260 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 0-260 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-260 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LEJC01000067.1 Pseudomonas aeruginosa strain Pae_CF67.11j CF67.11j_contig_67, whole genome shotgun sequence

⇒Summary: seq-len = 309 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-320 bp Zoom in on locus 1 x6 CRISPR array Location: 0-320 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-320 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-320 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)