CRISPRone

CRISPRone report for GCA_001036415.1_ASM103641v1

♦ Seq 1: LEJK01000031.1 Pseudomonas aeruginosa strain Pae_CF67.11p CF67.11p_contig_31, whole genome shotgun sequence

⇒Summary: seq-len = 208183 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 207309-207937 bp Zoom in on locus 1 x11 CRISPR array Location: 207309-207937 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 207309-207937 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 207309-207937 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJK01000040.1 Pseudomonas aeruginosa strain Pae_CF67.11p CF67.11p_contig_40, whole genome shotgun sequence

⇒Summary: seq-len = 22905 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 246-11933 bp Zoom in on locus 1 x21 x26 CRISPR array Location: 246-1475 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 246-1475 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 1735-2709 bp Gene: COG1203:cas3 Type: Type-I Location: 2706-5936 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6347-7648 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7635-8618 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8629-9657 bp Gene: cd09739:cas6f Type: other Location: 9661-10224 bp CRISPR array Location: 10409-11933 bp Num of repeats: 26 Spacers: s21-s45 CRISPR array Location: 10409-11933 bp Num of repeats: 26 Spacers: s21-s45 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 246-1475 bp]: array | spacers
           [Locus range 10409-11933 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)