CRISPRone

CRISPRone report for GCA_001036585.1_ASM103658v1

♦ Seq 1: LEJT01000025.1 Pseudomonas aeruginosa strain Pae_CF67.12h CF67.12h_contig_25, whole genome shotgun sequence

⇒Summary: seq-len = 120564 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120477-120564 bp Zoom in on locus 1 x2 CRISPR array Location: 120477-120564 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 120477-120564 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 120477-120564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJT01000069.1 Pseudomonas aeruginosa strain Pae_CF67.12h CF67.12h_contig_69, whole genome shotgun sequence

⇒Summary: seq-len = 20700 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4-1412 bp Zoom in on locus 1 x24 CRISPR array Location: 4-1412 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 4-1412 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 4-1412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEJT01000033.1 Pseudomonas aeruginosa strain Pae_CF67.12h CF67.12h_contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 10963 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 213-10071 bp Zoom in on locus 1 x19 Gene: cd09739:cas6f Type: other Location: 213-776 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 780-1808 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1819-2802 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2789-4090 bp Gene: COG1203:cas3 Type: Type-I Location: 4501-7731 bp Gene: cd09718:cas1 Type: universal Location: 7728-8702 bp CRISPR array Location: 8963-10071 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 8963-10071 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8963-10071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)