CRISPRone

CRISPRone report for GCA_001036645.1_ASM103664v1

♦ Seq 1: LEJV01000053.1 Pseudomonas aeruginosa strain Pae_CF67.12j CF67.12j_contig_53, whole genome shotgun sequence

⇒Summary: seq-len = 11727 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-10837 bp Zoom in on locus 1 x14 x19 CRISPR array Location: 0-795 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 0-795 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 979-1542 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1546-2574 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2585-3568 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3555-4856 bp Gene: COG1203:cas3 Type: Type-I Location: 5267-8497 bp Gene: cd09718:cas1 Type: universal Location: 8494-9468 bp CRISPR array Location: 9729-10837 bp Num of repeats: 19 Spacers: s14-s31 CRISPR array Location: 9729-10837 bp Num of repeats: 19 Spacers: s14-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-795 bp]: array | spacers
           [Locus range 9729-10837 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJV01000009.1 Pseudomonas aeruginosa strain Pae_CF67.12j CF67.12j_contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 179884 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111052-111860 bp Zoom in on locus 1 x14 CRISPR array Location: 111052-111860 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 111052-111860 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 111052-111860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)