CRISPRone

CRISPRone report for GCA_001036655.1_ASM103665v1

♦ Seq 1: LEJW01000153.1 Pseudomonas aeruginosa strain Pae_CF67.12k CF67.12k_contig_153, whole genome shotgun sequence

⇒Summary: seq-len = 318 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-318 bp Zoom in on locus 1 x6 CRISPR array Location: 0-318 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 0-318 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-318 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJW01000035.1 Pseudomonas aeruginosa strain Pae_CF67.12k CF67.12k_contig_35, whole genome shotgun sequence

⇒Summary: seq-len = 48681 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-48393 bp Zoom in on locus 1 x27 CRISPR array Location: 38135-39720 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38135-39720 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39904-40467 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40471-41499 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41510-42493 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42480-43781 bp Gene: COG1203:cas3 Type: Type-I Location: 44192-47422 bp Gene: cd09718:cas1 Type: universal Location: 47419-48393 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38135-39720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEJW01000070.1 Pseudomonas aeruginosa strain Pae_CF67.12k CF67.12k_contig_70, whole genome shotgun sequence

⇒Summary: seq-len = 33558 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 323-952 bp Zoom in on locus 1 x11 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 323-952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)