CRISPRone

CRISPRone report for GCA_001036725.1_ASM103672v1

♦ Seq 1: LEJZ01000065.1 Pseudomonas aeruginosa strain Pae_CF67.12n CF67.12n_contig_65, whole genome shotgun sequence

⇒Summary: seq-len = 245649 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 52608-53236 bp Zoom in on locus 1 x11 CRISPR array Location: 52608-53236 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 52608-53236 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 52608-53236 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEJZ01000157.1 Pseudomonas aeruginosa strain Pae_CF67.12n CF67.12n_contig_157, whole genome shotgun sequence

⇒Summary: seq-len = 1197 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 982-1194 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 982-1194 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEJZ01000080.1 Pseudomonas aeruginosa strain Pae_CF67.12n CF67.12n_contig_80, whole genome shotgun sequence

⇒Summary: seq-len = 71287 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21286-33153 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 21286-22635 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21286-22635 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 22895-23869 bp Gene: COG1203:cas3 Type: Type-I Location: 23866-27096 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27507-28808 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28795-29778 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29789-30817 bp Gene: cd09739:cas6f Type: other Location: 30821-31384 bp CRISPR array Location: 31569-33153 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 31569-33153 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21286-22635 bp]: array | spacers
           [Locus range 31569-33153 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)