CRISPRone

CRISPRone report for GCA_001036905.1_ASM103690v1

♦ Seq 1: LEEZ01000081.1 Pseudomonas aeruginosa strain Pae_CF67.06b CF67.06b_contig_81, whole genome shotgun sequence

⇒Summary: seq-len = 38392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38305-38393 bp Zoom in on locus 1 x2 CRISPR array Location: 38305-38393 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 38305-38393 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38305-38393 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEEZ01000023.1 Pseudomonas aeruginosa strain Pae_CF67.06b CF67.06b_contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 452266 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-10420 bp Zoom in on locus 1 x3 x23 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 322-885 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 889-1917 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1928-2911 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2898-4199 bp Gene: COG1203:cas3 Type: Type-I Location: 4610-7840 bp Gene: cd09718:cas1 Type: universal Location: 7837-8811 bp CRISPR array Location: 9072-10420 bp Num of repeats: 23 Spacers: s3-s24 CRISPR array Location: 9072-10420 bp Num of repeats: 23 Spacers: s3-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-138 bp]: array | spacers
           [Locus range 9072-10420 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)