CRISPRone

CRISPRone report for GCA_001036915.1_ASM103691v1

♦ Seq 1: LEFB01000098.1 Pseudomonas aeruginosa strain Pae_CF67.06d CF67.06d_contig_98, whole genome shotgun sequence

⇒Summary: seq-len = 12027 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110-11918 bp Zoom in on locus 1 x26 x23 CRISPR array Location: 110-1636 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 110-1636 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09739:cas6f Type: other Location: 1820-2383 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2387-3415 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 3426-4409 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4396-5697 bp Gene: COG1203:cas3 Type: Type-I Location: 6108-9338 bp Gene: cd09718:cas1 Type: universal Location: 9335-10309 bp CRISPR array Location: 10570-11918 bp Num of repeats: 23 Spacers: s26-s47 CRISPR array Location: 10570-11918 bp Num of repeats: 23 Spacers: s26-s47 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 110-1636 bp]: array | spacers
           [Locus range 10570-11918 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFB01000076.1 Pseudomonas aeruginosa strain Pae_CF67.06d CF67.06d_contig_76, whole genome shotgun sequence

⇒Summary: seq-len = 26436 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-616 bp Zoom in on locus 1 x11 CRISPR array Location: 0-616 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 0-616 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)