CRISPRone

CRISPRone report for GCA_001036965.1_ASM103696v1

♦ Seq 1: LEFC01000122.1 Pseudomonas aeruginosa strain Pae_CF67.06e CF67.06e_contig_122, whole genome shotgun sequence

⇒Summary: seq-len = 11508 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 898-11508 bp Zoom in on locus 1 x23 x6 CRISPR array Location: 898-2247 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 898-2247 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2507-3481 bp Gene: COG1203:cas3 Type: Type-I Location: 3478-6708 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7119-8420 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8407-9390 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9401-10429 bp Gene: cd09739:cas6f Type: other Location: 10433-10996 bp CRISPR array Location: 11181-11508 bp Num of repeats: 6 Spacers: s23-s27 CRISPR array Location: 11181-11508 bp Num of repeats: 6 Spacers: s23-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 898-2247 bp]: array | spacers
           [Locus range 11181-11508 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFC01000043.1 Pseudomonas aeruginosa strain Pae_CF67.06e CF67.06e_contig_43, whole genome shotgun sequence

⇒Summary: seq-len = 164178 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 162976-163725 bp Zoom in on locus 1 x13 CRISPR array Location: 162976-163725 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 162976-163725 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 162976-163725 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)