CRISPRone

CRISPRone report for GCA_001036975.1_ASM103697v1

♦ Seq 1: LEFD01000010.1 Pseudomonas aeruginosa strain Pae_CF67.06f CF67.06f_contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 111121 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-138 bp Zoom in on locus 1 x3 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFD01000061.1 Pseudomonas aeruginosa strain Pae_CF67.06f CF67.06f_contig_61, whole genome shotgun sequence

⇒Summary: seq-len = 31623 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21313-31411 bp Zoom in on locus 1 x23 CRISPR array Location: 21313-22662 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21313-22662 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 22922-23896 bp Gene: COG1203:cas3 Type: Type-I Location: 23893-27123 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27534-28835 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28822-29805 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29816-30844 bp Gene: cd09739:cas6f Type: other Location: 30848-31411 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21313-22662 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEFD01000074.1 Pseudomonas aeruginosa strain Pae_CF67.06f CF67.06f_contig_74, whole genome shotgun sequence

⇒Summary: seq-len = 389 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-390 bp Zoom in on locus 1 x7 CRISPR array Location: 1-390 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1-390 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEFD01000073.1 Pseudomonas aeruginosa strain Pae_CF67.06f CF67.06f_contig_73, whole genome shotgun sequence

⇒Summary: seq-len = 39021 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38934-39022 bp Zoom in on locus 1 x2 CRISPR array Location: 38934-39022 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 38934-39022 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38934-39022 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)