CRISPRone

CRISPRone report for GCA_001036985.1_ASM103698v1

♦ Seq 1: LEFE01000019.1 Pseudomonas aeruginosa strain Pae_CF67.06g CF67.06g_contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 38458 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 821-12687 bp Zoom in on locus 1 x23 x7 x19 CRISPR array Location: 821-2170 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 821-2170 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2430-3404 bp Gene: COG1203:cas3 Type: Type-I Location: 3401-6631 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7042-8343 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8330-9313 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9324-10352 bp Gene: cd09739:cas6f Type: other Location: 10356-10919 bp CRISPR array Location: 11104-11491 bp Num of repeats: 7 Spacers: s23-s28 CRISPR array Location: 11104-11491 bp Num of repeats: 7 Spacers: s23-s28 CRISPR array Location: 11579-12687 bp Num of repeats: 19 Spacers: s29-s46 CRISPR array Location: 11579-12687 bp Num of repeats: 19 Spacers: s29-s46 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 821-2170 bp]: array | spacers
           [Locus range 11104-11491 bp]: array | spacers
           [Locus range 11579-12687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)