CRISPRone

CRISPRone report for GCA_001037025.1_ASM103702v1

♦ Seq 1: LEFG01000035.1 Pseudomonas aeruginosa strain Pae_CF67.06i CF67.06i_contig_35, whole genome shotgun sequence

⇒Summary: seq-len = 37409 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 834-11620 bp Zoom in on locus 1 x23 x9 CRISPR array Location: 834-2183 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 834-2183 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2443-3417 bp Gene: COG1203:cas3 Type: Type-I Location: 3414-6644 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7055-8356 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8343-9326 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9337-10365 bp Gene: cd09739:cas6f Type: other Location: 10369-10932 bp CRISPR array Location: 11117-11620 bp Num of repeats: 9 Spacers: s23-s30 CRISPR array Location: 11117-11620 bp Num of repeats: 9 Spacers: s23-s30 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 834-2183 bp]: array | spacers
           [Locus range 11117-11620 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)