CRISPRone

CRISPRone report for GCA_001037065.1_ASM103706v1

♦ Seq 1: LEFK01000016.1 Pseudomonas aeruginosa strain Pae_CF67.06n CF67.06n_contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 58941 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21297-33164 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 21297-22646 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21297-22646 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 22906-23880 bp Gene: COG1203:cas3 Type: Type-I Location: 23877-27107 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27518-28819 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28806-29789 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29800-30828 bp Gene: cd09739:cas6f Type: other Location: 30832-31395 bp CRISPR array Location: 31580-33164 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 31580-33164 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21297-22646 bp]: array | spacers
           [Locus range 31580-33164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)