CRISPRone

CRISPRone report for GCA_001037145.1_ASM103714v1

♦ Seq 1: LEFP01000238.1 Pseudomonas aeruginosa strain Pae_CF67.06s CF67.06s_contig_238, whole genome shotgun sequence

⇒Summary: seq-len = 389 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-389 bp Zoom in on locus 1 x7 CRISPR array Location: 1-389 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 1-389 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-389 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFP01000046.1 Pseudomonas aeruginosa strain Pae_CF67.06s CF67.06s_contig_46, whole genome shotgun sequence

⇒Summary: seq-len = 7878 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-510 bp Zoom in on locus 1 x9 CRISPR array Location: 1-510 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 1-510 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-510 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEFP01000020.1 Pseudomonas aeruginosa strain Pae_CF67.06s CF67.06s_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 24537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-138 bp Zoom in on locus 1 x3 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 0-138 bp Num of repeats: 3 Spacers: s1-s2 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEFP01000192.1 Pseudomonas aeruginosa strain Pae_CF67.06s CF67.06s_contig_192, whole genome shotgun sequence

⇒Summary: seq-len = 10312 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 209-10312 bp Zoom in on locus 1 x23 Gene: cd09739:cas6f Type: other Location: 209-772 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 776-1804 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1815-2798 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2785-3903 bp Gene: COG1203:cas3 Type: Type-I Location: 4502-7732 bp Gene: cd09718:cas1 Type: universal Location: 7729-8703 bp CRISPR array Location: 8964-10312 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 8964-10312 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8964-10312 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)