CRISPRone

CRISPRone report for GCA_001037185.1_ASM103718v1

♦ Seq 1: LEFT01000014.1 Pseudomonas aeruginosa strain Pae_CF67.07c CF67.07c_contig_14, whole genome shotgun sequence

⇒Summary: seq-len = 62541 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-209 bp Zoom in on locus 1 x4 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-209 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFT01000076.1 Pseudomonas aeruginosa strain Pae_CF67.07c CF67.07c_contig_76, whole genome shotgun sequence

⇒Summary: seq-len = 48621 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-48333 bp Zoom in on locus 1 x26 CRISPR array Location: 38135-39660 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 38135-39660 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09739:cas6f Type: other Location: 39844-40407 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40411-41439 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41450-42433 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42420-43721 bp Gene: COG1203:cas3 Type: Type-I Location: 44132-47362 bp Gene: cd09718:cas1 Type: universal Location: 47359-48333 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38135-39660 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)