CRISPRone

CRISPRone report for GCA_001037275.1_ASM103727v1

♦ Seq 1: LEFL01000009.1 Pseudomonas aeruginosa strain Pae_CF67.06o CF67.06o_contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 38067 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 660-12526 bp Zoom in on locus 1 x23 x8 x18 CRISPR array Location: 660-2009 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 660-2009 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2269-3243 bp Gene: COG1203:cas3 Type: Type-I Location: 3240-6470 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6881-8182 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8169-9152 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9163-10191 bp Gene: cd09739:cas6f Type: other Location: 10195-10758 bp CRISPR array Location: 10943-11386 bp Num of repeats: 8 Spacers: s23-s29 CRISPR array Location: 10943-11386 bp Num of repeats: 8 Spacers: s23-s29 CRISPR array Location: 11478-12526 bp Num of repeats: 18 Spacers: s30-s46 CRISPR array Location: 11478-12526 bp Num of repeats: 18 Spacers: s30-s46 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 660-2009 bp]: array | spacers
           [Locus range 10943-11386 bp]: array | spacers
           [Locus range 11478-12526 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)