CRISPRone

CRISPRone report for GCA_001037315.1_ASM103731v1

♦ Seq 1: LEGC01000102.1 Pseudomonas aeruginosa strain Pae_CF67.07l CF67.07l_contig_102, whole genome shotgun sequence

⇒Summary: seq-len = 739 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-739 bp Zoom in on locus 1 x13 CRISPR array Location: 0-739 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 0-739 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-739 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEGC01000109.1 Pseudomonas aeruginosa strain Pae_CF67.07l CF67.07l_contig_109, whole genome shotgun sequence

⇒Summary: seq-len = 324 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-324 bp Zoom in on locus 1 x6 CRISPR array Location: 1-324 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1-324 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-324 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEGC01000061.1 Pseudomonas aeruginosa strain Pae_CF67.07l CF67.07l_contig_61, whole genome shotgun sequence

⇒Summary: seq-len = 62360 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62273-62360 bp Zoom in on locus 1 x2 CRISPR array Location: 62273-62360 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 62273-62360 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62273-62360 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEGC01000027.1 Pseudomonas aeruginosa strain Pae_CF67.07l CF67.07l_contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 337576 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 337198-337587 bp Zoom in on locus 1 x7 CRISPR array Location: 337198-337587 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 337198-337587 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 337198-337587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: LEGC01000026.1 Pseudomonas aeruginosa strain Pae_CF67.07l CF67.07l_contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 32293 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21987-32085 bp Zoom in on locus 1 x23 CRISPR array Location: 21987-23336 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21987-23336 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23596-24570 bp Gene: COG1203:cas3 Type: Type-I Location: 24567-27797 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28208-29509 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29496-30479 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30490-31518 bp Gene: cd09739:cas6f Type: other Location: 31522-32085 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21987-23336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)