CRISPRone

CRISPRone report for GCA_001037435.1_ASM103743v1

♦ Seq 1: LEGM01000067.1 Pseudomonas aeruginosa strain Pae_CF67.08b CF67.08b_contig_67, whole genome shotgun sequence

⇒Summary: seq-len = 25734 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25659-25747 bp Zoom in on locus 1 x2 CRISPR array Location: 25659-25747 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 25659-25747 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 25659-25747 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEGM01000172.1 Pseudomonas aeruginosa strain Pae_CF67.08b CF67.08b_contig_172, whole genome shotgun sequence

⇒Summary: seq-len = 11949 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-570 bp Zoom in on locus 1 x10 CRISPR array Location: 1-570 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1-570 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEGM01000010.1 Pseudomonas aeruginosa strain Pae_CF67.08b CF67.08b_contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 44166 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-10819 bp Zoom in on locus 1 x23 x2 x6 CRISPR array Location: 1-1350 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 1-1350 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 1610-2584 bp Gene: COG1203:cas3 Type: Type-I Location: 2581-5811 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6413-7531 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7518-8501 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8512-9540 bp Gene: cd09739:cas6f Type: other Location: 9544-10107 bp CRISPR array Location: 10292-10379 bp Num of repeats: 2 Spacers: s23-s23 CRISPR array Location: 10292-10379 bp Num of repeats: 2 Spacers: s23-s23 CRISPR array Location: 10496-10819 bp Num of repeats: 6 Spacers: s24-s28 CRISPR array Location: 10496-10819 bp Num of repeats: 6 Spacers: s24-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-1350 bp]: array | spacers
           [Locus range 10292-10379 bp]: array | spacers
           [Locus range 10496-10819 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEGM01000417.1 Pseudomonas aeruginosa strain Pae_CF67.08b CF67.08b_contig_417, whole genome shotgun sequence

⇒Summary: seq-len = 329 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-330 bp Zoom in on locus 1 x6 CRISPR array Location: 1-330 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1-330 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-330 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)