CRISPRone

CRISPRone report for GCA_001056335.1_ASM105633v1

♦ Seq 1: JVLQ01000142.1 Bacteroides fragilis strain 321_BFRA 774_128171_2316969_670+,...,530_, whole genome shotgun sequence

⇒Summary: seq-len = 128199 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 119694-127001 bp Zoom in on locus 1 x8 Gene: cd09643:cas9 Type: Subtype-II-C Location: 119694-124004 bp Gene: unk Type: unknown Location: 124020-124544 bp Gene: unk Type: unknown Location: 124611-124919 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 125039-125971 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 125975-126307 bp CRISPR array Location: 126417-127001 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 126417-127001 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 126417-127001 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JVLQ01000105.1 Bacteroides fragilis strain 321_BFRA 737_46266_751890_440_,77+, whole genome shotgun sequence

⇒Summary: seq-len = 46266 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17477-26654 bp Zoom in on locus 1 x21 Gene: cd09652:cas6 Type: other Location: 17477-18148 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 18160-18723 bp Gene: COG1203:cas3 Type: Type-I Location: 18713-20872 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 20876-22201 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 22214-23272 bp Gene: pfam01930:cas4 Type: Type-I Location: 23337-23849 bp Gene: cd09722:cas1 Type: universal Location: 23846-24859 bp Gene: cd09725:cas2 Type: universal Location: 24862-25125 bp CRISPR array Location: 25338-26654 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 25338-26654 bp Num of repeats: 21 Spacers: s1-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25338-26654 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JVLQ01000122.1 Bacteroides fragilis strain 321_BFRA 754_33160_594176_544+,112+, whole genome shotgun sequence

⇒Summary: seq-len = 33160 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19471-23084 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 19471-20139 bp Gene: unk Type: unknown Location: 20142-20915 bp Gene: unk Type: unknown Location: 20923-22188 bp Gene: pfam13280:WYL Type: other Location: 22185-23084 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)