CRISPRone

CRISPRone report for GCA_001058745.1_ASM105874v1

♦ Seq 1: JUPK01003829.1 Bacteroides fragilis strain 884_BFRA 5135_206_532, whole genome shotgun sequence

⇒Summary: seq-len = 206 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 48-153 bp Zoom in on locus 1 x2 CRISPR array Location: 48-153 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 48-153 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 48-153 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUPK01005336.1 Bacteroides fragilis strain 884_BFRA 7190_102185_1705679, whole genome shotgun sequence

⇒Summary: seq-len = 102185 bp; # of CRISPR array = 0; # of cas gene = 5  (type I, II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 84811-95451 bp Zoom in on locus 1 Gene: COG2378:WYL Type: other Location: 84811-85254 bp Gene: unk Type: unknown Location: 85254-85490 bp Gene: pfam13280:WYL Type: other Location: 85531-86166 bp Gene: unk Type: unknown Location: 86449-87270 bp Gene: unk Type: unknown Location: 87362-88225 bp Gene: pfam13280:WYL Type: other Location: 88667-89572 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 89572-92850 bp Gene: unk Type: unknown Location: 92847-93536 bp Gene: cd12217:csn2 Type: Subtype-II-A Location: 93571-95451 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JUPK01003906.1 Bacteroides fragilis strain 884_BFRA 5249_742_3115, whole genome shotgun sequence

⇒Summary: seq-len = 742 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-741 bp Zoom in on locus 1 Gene: pfam01867:cas1 Type: universal Location: 1-741 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JUPK01003095.1 Bacteroides fragilis strain 884_BFRA 4121_652_2688, whole genome shotgun sequence

⇒Summary: seq-len = 652 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6-662 bp Zoom in on locus 1 x10 CRISPR array Location: 6-662 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 6-662 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6-662 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JUPK01001243.1 Bacteroides fragilis strain 884_BFRA 1670_465_1440, whole genome shotgun sequence

⇒Summary: seq-len = 465 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-235 bp Zoom in on locus 1 Gene: cd09725:cas2 Type: universal Location: 2-235 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)