CRISPRone

CRISPRone report for GCA_001058775.1_ASM105877v1

♦ Seq 1: JUOZ01000062.1 Bacteroides fragilis strain 894_BFRA 183_59848_1059985, whole genome shotgun sequence

⇒Summary: seq-len = 59848 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46169-49782 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 46169-46837 bp Gene: unk Type: unknown Location: 46840-47613 bp Gene: unk Type: unknown Location: 47621-48886 bp Gene: pfam13280:WYL Type: other Location: 48883-49782 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUOZ01000328.1 Bacteroides fragilis strain 894_BFRA 1046_29360_369256, whole genome shotgun sequence

⇒Summary: seq-len = 29360 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 23827-29328 bp Zoom in on locus 1 Gene: cls000004:cas6 Type: other Location: 23827-24558 bp Gene: unk Type: unknown Location: 24576-25202 bp Gene: unk Type: unknown Location: 25178-25957 bp Gene: cash17:cash17 Type: Type- Location: 26002-27429 bp Gene: unk Type: unknown Location: 27426-27905 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 27919-29328 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JUOZ01000178.1 Bacteroides fragilis strain 894_BFRA 562_19706_233970, whole genome shotgun sequence

⇒Summary: seq-len = 19706 bp; # of CRISPR array = 1; # of cas gene = 7  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-9352 bp Zoom in on locus 1 x18 Gene: cls000742:cas10 Type: Type-III Location: 3-1745 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1738-2877 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 2897-3736 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 3749-4159 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 4156-5106 bp Gene: cd09634:cas1 Type: universal Location: 5126-7396 bp Gene: cd09725:cas2 Type: universal Location: 7390-7680 bp CRISPR array Location: 8128-9352 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 8128-9352 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8128-9352 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)