CRISPRone

CRISPRone report for GCA_001062835.1_ASM106283v1

♦ Seq 1: JVSG01001160.1 Pseudomonas aeruginosa strain 150_PMEN 2394_1864_10405, whole genome shotgun sequence

⇒Summary: seq-len = 1864 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-1863 bp Zoom in on locus 1 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2-157 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 168-1151 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1138-1863 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JVSG01001713.1 Pseudomonas aeruginosa strain 150_PMEN 3530_4116_28857_1913+,2079+, whole genome shotgun sequence

⇒Summary: seq-len = 4116 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-4114 bp Zoom in on locus 1 Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3-545 bp Gene: COG1203:cas3 Type: Type-I Location: 603-3833 bp Gene: cd09718:cas1 Type: universal Location: 3830-4114 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JVSG01001015.1 Pseudomonas aeruginosa strain 150_PMEN 2070_976_6539, whole genome shotgun sequence

⇒Summary: seq-len = 976 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-687 bp Zoom in on locus 1 Gene: COG1518:cas1 Type: universal Location: 1-687 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JVSG01001186.1 Pseudomonas aeruginosa strain 150_PMEN 2443_1284_8256, whole genome shotgun sequence

⇒Summary: seq-len = 1284 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-1281 bp Zoom in on locus 1 x2 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 2-90 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09739:cas6f Type: other Location: 274-837 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 841-1281 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2-90 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)