CRISPRone

CRISPRone report for GCA_001063225.1_ASM106322v1

♦ Seq 1: JVJX01000186.1 Pseudomonas aeruginosa strain 367_PAER 1578_335777_4374785_809_,...,912_, whole genome shotgun sequence

⇒Summary: seq-len = 335777 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21644-33503 bp Zoom in on locus 1 x28 x16 CRISPR array Location: 21644-23322 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 21644-23322 bp Num of repeats: 28 Spacers: s1-s27 Gene: pfam09707:cas2 Type: universal Location: 23387-23686 bp Gene: cd09719:cas1 Type: universal Location: 23683-24573 bp Gene: pfam08798:cas6e Type: other Location: 24600-25139 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 25186-25848 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 25850-26992 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 27002-27532 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 27529-29097 bp Gene: cd09641:cas3HD Type: Type-I Location: 29100-31781 bp CRISPR array Location: 32558-33503 bp Num of repeats: 16 Spacers: s28-s42 CRISPR array Location: 32558-33503 bp Num of repeats: 16 Spacers: s28-s42 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21644-23322 bp]: array | spacers
           [Locus range 32558-33503 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)