CRISPRone

CRISPRone report for GCA_001064905.1_ASM106490v1

♦ Seq 1: JVHM01000026.1 Pseudomonas aeruginosa strain 427_PAER 673_69449_931313_275_,...,28_, whole genome shotgun sequence

⇒Summary: seq-len = 69449 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21251-31850 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 21251-21819 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 21251-21819 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 22070-23044 bp Gene: COG1203:cas3 Type: Type-I Location: 23041-26271 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26682-27983 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27970-28953 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28964-29992 bp Gene: cd09739:cas6f Type: other Location: 29996-30559 bp CRISPR array Location: 30743-31850 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 30743-31850 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21251-21819 bp]: array | spacers
           [Locus range 30743-31850 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)