CRISPRone

CRISPRone report for GCA_001065395.1_ASM106539v1

♦ Seq 1: JVCT01000105.1 Pseudomonas aeruginosa strain 545_PAER 1179_264133_3805627_957_,...,196_, whole genome shotgun sequence

⇒Summary: seq-len = 264133 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 120906-131202 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 120906-121606 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 120906-121606 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 122378-125059 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 125062-126630 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 126627-127157 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 127167-128309 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 128311-128973 bp Gene: pfam08798:cas6e Type: other Location: 128948-129559 bp Gene: cd09719:cas1 Type: universal Location: 129586-129897 bp Gene: pfam09707:cas2 Type: universal Location: 129894-130193 bp CRISPR array Location: 130258-131202 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 130258-131202 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 120906-121606 bp]: array | spacers
           [Locus range 130258-131202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)