CRISPRone

CRISPRone report for GCA_001065515.1_ASM106551v1

♦ Seq 1: JVBK01000099.1 Pseudomonas aeruginosa strain 576_PAER 278_18867_268323, whole genome shotgun sequence

⇒Summary: seq-len = 18867 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7647-17967 bp Zoom in on locus 1 x14 x16 CRISPR array Location: 7647-8454 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 7647-8454 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 8637-9200 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9204-10232 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 10243-11226 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 11213-12517 bp Gene: COG1203:cas3 Type: Type-I Location: 12575-15805 bp Gene: cd09718:cas1 Type: universal Location: 15802-16776 bp CRISPR array Location: 17037-17967 bp Num of repeats: 16 Spacers: s14-s28 CRISPR array Location: 17037-17967 bp Num of repeats: 16 Spacers: s14-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7647-8454 bp]: array | spacers
           [Locus range 17037-17967 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)