CRISPRone

CRISPRone report for GCA_001066185.1_ASM106618v1

♦ Seq 1: JUUU01000339.1 Pseudomonas aeruginosa strain 744_PAER 674_15260_142698, whole genome shotgun sequence

⇒Summary: seq-len = 15260 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 152-1259 bp Zoom in on locus 1 x19 CRISPR array Location: 152-1259 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 152-1259 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 152-1259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUUU01000514.1 Pseudomonas aeruginosa strain 744_PAER 1015_3792_34740, whole genome shotgun sequence

⇒Summary: seq-len = 3792 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 61-3791 bp Zoom in on locus 1 Gene: cd09739:cas6f Type: other Location: 61-624 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 628-1656 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1667-2650 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2637-3791 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JUUU01000335.1 Pseudomonas aeruginosa strain 744_PAER 670_881_11313, whole genome shotgun sequence

⇒Summary: seq-len = 881 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 531-798 bp Zoom in on locus 1 x5 CRISPR array Location: 531-798 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 531-798 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 531-798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JUUU01000168.1 Pseudomonas aeruginosa strain 744_PAER 326_577_8568, whole genome shotgun sequence

⇒Summary: seq-len = 577 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99-488 bp Zoom in on locus 1 x7 CRISPR array Location: 99-488 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 99-488 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 99-488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JUUU01000429.1 Pseudomonas aeruginosa strain 744_PAER 848_5675_54682, whole genome shotgun sequence

⇒Summary: seq-len = 5675 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 557-5577 bp Zoom in on locus 1 x10 Gene: COG1203:cas3 Type: Type-I Location: 557-3787 bp Gene: cd09718:cas1 Type: universal Location: 3784-4758 bp CRISPR array Location: 5010-5577 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 5010-5577 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5010-5577 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)