CRISPRone

CRISPRone report for GCA_001066895.1_ASM106689v1

♦ Seq 1: JUXE01000073.1 Pseudomonas aeruginosa strain 685_PAER 143_120620_2016961, whole genome shotgun sequence

⇒Summary: seq-len = 120620 bp; # of CRISPR array = 0; # of cas gene = 4  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 14509-22770 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 14509-16875 bp Gene: unk Type: unknown Location: 17268-17915 bp Gene: unk Type: unknown Location: 17981-18268 bp Gene: COG2378:WYL Type: other Location: 18399-19241 bp Gene: pfam13280:WYL Type: other Location: 19983-20999 bp Gene: mkCas0115:csx3 Type: other Location: 21145-22770 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUXE01000156.1 Pseudomonas aeruginosa strain 685_PAER 302_7642_115666, whole genome shotgun sequence

⇒Summary: seq-len = 7642 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6310-7357 bp Zoom in on locus 1 x18 CRISPR array Location: 6310-7357 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 6310-7357 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6310-7357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)