CRISPRone

CRISPRone report for GCA_001067395.1_ASM106739v1

♦ Seq 1: JUSS01000302.1 Pseudomonas aeruginosa strain 792_PAER 793_7014_124386, whole genome shotgun sequence

⇒Summary: seq-len = 7014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6252-6880 bp Zoom in on locus 1 x11 CRISPR array Location: 6252-6880 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 6252-6880 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 6252-6880 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUSS01000267.1 Pseudomonas aeruginosa strain 792_PAER 694_37947_509868, whole genome shotgun sequence

⇒Summary: seq-len = 37947 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 135-12122 bp Zoom in on locus 1 x24 x28 CRISPR array Location: 135-1544 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 135-1544 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 1804-2778 bp Gene: COG1203:cas3 Type: Type-I Location: 2775-6005 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6416-7717 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7704-8687 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8698-9726 bp Gene: cd09739:cas6f Type: other Location: 9730-10293 bp CRISPR array Location: 10478-12122 bp Num of repeats: 28 Spacers: s24-s50 CRISPR array Location: 10478-12122 bp Num of repeats: 28 Spacers: s24-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 135-1544 bp]: array | spacers
           [Locus range 10478-12122 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)