CRISPRone

CRISPRone report for GCA_001068115.1_ASM106811v1

♦ Seq 1: JUOL01000119.1 Pseudomonas aeruginosa strain 908_PAER 281_7026_129856, whole genome shotgun sequence

⇒Summary: seq-len = 7026 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141-770 bp Zoom in on locus 1 x11 CRISPR array Location: 141-770 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 141-770 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 141-770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUOL01000206.1 Pseudomonas aeruginosa strain 908_PAER 504_48773_703225, whole genome shotgun sequence

⇒Summary: seq-len = 48773 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141-12128 bp Zoom in on locus 1 x25 x27 CRISPR array Location: 141-1610 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 141-1610 bp Num of repeats: 25 Spacers: s1-s24 Gene: cd09718:cas1 Type: universal Location: 1870-2844 bp Gene: COG1203:cas3 Type: Type-I Location: 2841-6071 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6482-7783 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7770-8753 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8764-9792 bp Gene: cd09739:cas6f Type: other Location: 9796-10359 bp CRISPR array Location: 10544-12128 bp Num of repeats: 27 Spacers: s25-s50 CRISPR array Location: 10544-12128 bp Num of repeats: 27 Spacers: s25-s50 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 141-1610 bp]: array | spacers
           [Locus range 10544-12128 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)