CRISPRone

CRISPRone report for GCA_001086755.1_ASM108675v1

♦ Seq 1: LFMR01000014.1 Pseudomonas aeruginosa strain BTP034 MC15175104, whole genome shotgun sequence

⇒Summary: seq-len = 1036494 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 434415-444437 bp Zoom in on locus 1 x5 x9 CRISPR array Location: 434415-434688 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 434415-434688 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09641:cas3HD Type: Type-I Location: 435461-438142 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 438145-439713 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 439710-440240 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 440250-441392 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 441394-442056 bp Gene: pfam08798:cas6e Type: other Location: 442031-442642 bp Gene: cd09719:cas1 Type: universal Location: 442669-443559 bp Gene: pfam09707:cas2 Type: universal Location: 443556-443855 bp CRISPR array Location: 443920-444437 bp Num of repeats: 9 Spacers: s5-s12 CRISPR array Location: 443920-444437 bp Num of repeats: 9 Spacers: s5-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 434415-434688 bp]: array | spacers
           [Locus range 443920-444437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LFMR01000001.1 Pseudomonas aeruginosa strain BTP034 MC15175091, whole genome shotgun sequence

⇒Summary: seq-len = 3423208 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 834669-845895 bp 2 Locus 2: 1262492-1269614 bp Zoom in on locus 1 x19 x25 Zoom in on locus 2 CRISPR array Location: 834669-835777 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 834669-835777 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 836037-837011 bp Gene: COG1203:cas3 Type: Type-I Location: 837008-840238 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 840296-841600 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 841587-842570 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 842581-843609 bp Gene: cd09739:cas6f Type: other Location: 843613-844176 bp CRISPR array Location: 844426-845895 bp Num of repeats: 25 Spacers: s19-s42 CRISPR array Location: 844426-845895 bp Num of repeats: 25 Spacers: s19-s42 Gene: pfam13280:WYL Type: other Location: 1262492-1263364 bp Gene: pfam13280:WYL Type: other Location: 1263599-1264645 bp Gene: pfam13280:WYL Type: other Location: 1268619-1269614 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 834669-835777 bp]: array | spacers
           [Locus range 844426-845895 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)