CRISPRone

CRISPRone report for GCA_001280745.1_ASM128074v1

♦ Seq 1: LGJE01000059.1 Pseudomonas aeruginosa strain EML545 contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 128051 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32714-33041 bp Zoom in on locus 1 x6 CRISPR array Location: 32714-33041 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 32714-33041 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 32714-33041 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LGJE01000027.1 Pseudomonas aeruginosa strain EML545 contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 527139 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 404993-407195 bp Zoom in on locus 1 Gene: COG2378:WYL Type: other Location: 404993-405964 bp Gene: unk Type: unknown Location: 406074-406760 bp Gene: cd09693:cas5 Type: Type-I Location: 406788-407195 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LGJE01000008.1 Pseudomonas aeruginosa strain EML545 contig_11, whole genome shotgun sequence

⇒Summary: seq-len = 179907 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 124977-125365 bp Zoom in on locus 1 x7 CRISPR array Location: 124977-125365 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 124977-125365 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 124977-125365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)