CRISPRone

CRISPRone report for GCA_001286525.1_BFBE1.1

♦ Seq 1: LN877293.1 Bacteroides fragilis genome assembly BFBE1.1, chromosome : scaffold1

⇒Summary: seq-len = 5188967 bp; # of CRISPR array = 1; # of cas gene = 8  (type I, II, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2353365-2363083 bp 2 Locus 2: 3905979-3909592 bp 3 Locus 3: 4643208-4650933 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 x12 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 2353365-2354615 bp Gene: unk Type: unknown Location: 2354650-2354811 bp Gene: unk Type: unknown Location: 2354952-2355128 bp Gene: pfam13280:WYL Type: other Location: 2355894-2356904 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 2356943-2363083 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 3905979-3906647 bp Gene: unk Type: unknown Location: 3906650-3907423 bp Gene: unk Type: unknown Location: 3907431-3908696 bp Gene: pfam13280:WYL Type: other Location: 3908693-3909592 bp CRISPR array Location: 4643208-4644098 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 4643208-4644098 bp Num of repeats: 12 Spacers: s1-s11 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 4644207-4644539 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 4644543-4645475 bp Gene: unk Type: unknown Location: 4645595-4645903 bp Gene: unk Type: unknown Location: 4645970-4646494 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4646510-4650820 bp antiRepeat Location: 4650888-4650933 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4643208-4644098 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)